Ашниев Герман Альфредович

Education

2021

Master's in Biology
Lomonosov Moscow State University

Professional Interests

evolutionary genetics population genetics Human genetics epigenetics medical genetics phylogenetics application of machine learning methods to the analysis of biomedical data Data Mining and Machine Learning

Awards and Accomplishments

Best Teacher — 2025

Courses (2024/2025)

Bioinformatics for Next Generation Sequencing (Bachelor’s programme; Faculty of Biology and Biotechnology field of study Biology; 4 year, 1, 2 module)Rus
Sequencing Data Analysis 1 (Master’s programme; Faculty of Computer Science field of study Applied Mathematics and Informatics; 1 year, 4 module)Rus
Sequencing Data Analysis 1 (Mago-Lego; 4 module)Rus
Sequencing Data Analysis 2 (Master’s programme; Faculty of Computer Science field of study Applied Mathematics and Informatics; 2 year, 1, 2 module)Rus
Sequencing Data Analysis 2 (Mago-Lego; 1, 2 module)Rus
Past Courses

Timetable for today

Full timetable

Conferences

2017
XII Молодежная школа-конференция с международным участием «Актуальные аспекты современной микробиологии» (Moscow). Presentation: Использование сравнительно-геномного подхода для определения фенотипов бактерий кишечного микробиома в контексте метаболизма аминокислот

Employment history

	IOP RAS Bioinformatics department	Team lead of a small bioinformatics group Experimental planning process (RNA-Seq, ChiP-Seq, ATAC-Seq, SPRITE, Hi-C) Pipeline development and adaptation
Nov 2021 - Present	Centre for Strategic Planning	Metagenomic analysis Genome assembly In silico strain validation NGS data analysis In silico vaccine testing Statistical analysis
May 2017 – Present	Institute for Information Transmission Problems of the Russian Academy of Sciences Intern Researcher, Sector of Functional and Comparative Genomics	Analysis of the available metagenomic data and functional annotation of obtained genomes, including the search and prediction of new functional elements. Presentation of research results at conferences and scientific workshops (BGRS, MCCMB etc.). Scientific paper writing for journals with high citation index. Project leading for adaptation of intermediate tasks for collaborators responsible for private research parts.

6

Nov

2025

Cardiogenetics of the Future: Sequencing Helps Treat Heart Disease

Future cardiologists, geneticists, and IT specialists gathered at HSE University to learn how to 'read' DNA for diagnosing cardiovascular diseases. They explored modern sequencing methods and the complexities of working with digital twins of cardiac patients.

6

Dec

2023

R&D Day with Sber

On December 6, Sber held an R&D day

German Ashniev