Alexey Timofeev
- Leading Research Fellow:International Laboratory for Supercomputer Atomistic Modelling and Multi-scale Analysis
- Associate Professor:HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE) / School of Applied Mathematics
- Alexey Timofeev has been at HSE University since 2012.
Education and Degrees
- 2012
Candidate of Sciences* (PhD) in Plasma Physics
Moscow Institute of Physics and Technology
Thesis Title: Abnormal heating of the dust particles motion in the gas-discharge plasma - 2011
Doctoral programme in Plasma Physics
Moscow Institute of Physics and Technology, MBP - 2010
Master's in Applied Mathematics and Applied Physics
Moscow Institute of Physics and Technology
According to the International Standard Classification of Education (ISCED) 2011, Candidate of Sciences belongs to ISCED level 8 - "doctoral or equivalent", together with PhD, DPhil, D.Lit, D.Sc, LL.D, Doctorate or similar. Candidate of Sciences allows its holders to reach the level of the Associate Professor.
Awards and Accomplishments
- Best Teacher – 2018
Winner of the HSE University Best Russian Research Paper Competition – 2022
Responsibilities
provide scientific leadership and leadership of the research on High Performance Computing and on selected problems in computational physics;
organise and directly participate in the formation of reports on selected topics of High Performance Computing;
justify directions of new researches and developments and methods of their fulfilment.
Courses (2022/2023)
- High-Level Modelling and Simulation of Digital Systems (Mago-Lego; 1, 2 module)Rus
High-Level Modelling and Simulation of Digital Systems (Master’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); field of study "01.04.02. Прикладная математика и информатика", field of study "01.04.02. Прикладная математика и информатика", field of study "01.04.02. Прикладная математика и информатика"; 1 year, 1, 2 module)Rus
- Past Courses
Courses (2021/2022)
- High-Perfomance Computing (Master’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); 1 year, 1, 2 module)Rus
- Research Seminar (Bachelor’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); 4 year, 1-3 module)Rus
Courses (2020/2021)
Courses (2019/2020)
Courses (2018/2019)
- Parallel Computing (Specialist’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); 5 year, 1-3 module)Rus
- Research Seminar (Bachelor’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); 4 year, 1-3 module)Rus
- Research Seminar (Master’s programme; HSE Tikhonov Moscow Institute of Electronics and Mathematics (MIEM HSE); 1 year, 1-4 module)Rus
Courses (2017/2018)
Conferences
- 2021ФУНДАМЕНТАЛЬНЫЕ ОСНОВЫ АТОМИСТИЧЕСКОГО МНОГОМАСШТАБНОГО МОДЕЛИРОВАНИЯ (Новый Афон). Presentation: Уникальные свойства плазменно-пылевой системы
- ФУНДАМЕНТАЛЬНЫЕ ОСНОВЫ АТОМИСТИЧЕСКОГО МНОГОМАСШТАБНОГО МОДЕЛИРОВАНИЯ (Новый Афон). Presentation: Уникальные свойства плазменно-пылевой системы
- 2018Supercomputing frontiers Europe (Варшава). Presentation: Elbrus processors performance for fast Fourier transform and computational materials science codes
- 20178th International Conference on the Physics of Dusty Plasmas (Прага). Presentation: Configuration and Kolmogorov-Sinai entropy in dusty plasma model
- 2015DIAGNOSTICS AND SIMULATION OF DUSTY PLASMAS (Киль). Presentation: Divergence of dust particle trajectories and entropy in dusty plasma model
- 201441st EPS conference on plasma physics (Берлин). Presentation: Applicability of thermodynamic approach for dusty plasma description
- 12th Workshop “Complex Systems of Charged Particles and their Interaction with Electromagnetic Radiation” (Moscow). Presentation: Relaxation time and applicability of thermodynamic approach for dusty plasma description
- 201311th Complex Systems of Charged Particles and their Interaction with Electromagnetic Radiation (Moscow). Presentation: Energy transfer and parametric resonance in dusty structures in plasma.
- 40th Conference on Plasma Physics (Espoo). Presentation: Energy transfer in dusty structures in discharge plasma
- 11-й Российский симпозиум «ПРОБЛЕМЫ ФИЗИКИ УЛЬТРАКОРОТКИХ ПРОЦЕССОВ В СИЛЬНОНЕРАВНОВЕСНЫХ СРЕДАХ» (Новый Афон). Presentation: Энтропия в модели пылевой плазмы
Publications42
- Article Timofeev A., Kolotinskii D. OpenDust: A fast GPU-accelerated code for the calculation of forces acting on microparticles in a plasma flow // Computer Physics Communications. 2023. Vol. 288. Article 108746. doi
- Article Kolotinskii D. A., Nikolaev V. S., V. V. Stegailov, A. V. Timofeev. Point Defect Model for the kinetics of oxide film growth on the surface of T91 steel in contact with lead–bismuth eutectic // Corrosion Science. 2023. Vol. 211. Article 110829. doi
- Chapter Pugachev L., Umarov I., Popov V., Andreev N., Stegailov V., Alexei Timofeev. PIConGPU on Desmos Supercomputer: GPU Acceleration, Scalability and Storage Bottleneck, in: Supercomputing: 8th Russian Supercomputing Days, RuSCDays 2022, Moscow, Russia, September 26–27, 2022, Revised Selected Papers Vol. 13708. Springer, 2022. doi P. 290-302. doi
- Chapter Kolotinskii D., Alexei Timofeev. Performance Analysis of GPU-Based Code for Complex Plasma Simulation, in: Supercomputing: 8th Russian Supercomputing Days, RuSCDays 2022, Moscow, Russia, September 26–27, 2022, Revised Selected Papers Vol. 13708. Springer, 2022. doi P. 276-289. doi
- Chapter Timofeev A., Shamsutdinov A., Khalilov M., Ismagilov T., Piryugin A., Biryukov S., Stegailov V. Performance of Supercomputers Based on Angara Interconnect and Novel AMD CPUs/GPUs, in: 22nd International Conference, MMST 2022, Nizhny Novgorod, Russia, November 14–17, 2022, Revised Selected Papers. Springer, 2022. doi P. 401-416. doi
- Article Hariprasad M. G., Bandyopadhyay P., Nikolaev V. S., Kolotinskii D., Arumugam S., Arora G., Singh S., Sen A., Timofeev A. Self-sustained non-equilibrium co-existence of fluid and solid states in a strongly coupled complex plasma system // Scientific Reports. 2022. Vol. 12. Article 13882. doi
- Chapter Timofeev A., Khalilov M., Polyakov D. Towards OpenUCX and GPUDirect Technology Support for the Angara Interconnect, in: Supercomputing: 8th Russian Supercomputing Days, RuSCDays 2022, Moscow, Russia, September 26–27, 2022, Revised Selected Papers Vol. 13708. Springer, 2022. doi P. 591-603. doi
- Article Kolotinskii D., Nikolaev V. S., Timofeev A. Effect of Structural Inhomogeneity and Nonreciprocal Effects in the Interaction of Macroparticles on the Dynamic Properties of a Dusty Plasma Monolayer // JETP Letters. 2021. Vol. 113. P. 510-517. doi
- Article Nikolaev V. S., Timofeev A. Nonhomogeneity of phase state in a dusty plasma monolayer with nonreciprocal particle interactions // Physics of Plasmas. 2021. Vol. 28. Article 033704. doi
- Chapter Khalilov M., Timofeev A. Performance analysis of CUDA, OpenACC and OpenMP programming models on TESLA V100 GPU, in: International Conference on Computer Simulation in Physics and beyond (CSP 2020) 12-16 October 2020, Moscow, Russia / Ed. by L. Shchur. Vol. 1740. IOP Publishing, 2021. doi Ch. 012056. doi
- Chapter Timofeev A., Khalilov M. Evaluating OpenMP, OpenACC and CUDA parallel programming models for the GPU: Performance Analysis, in: Параллельные вычислительные технологии (ПаВТ'2020). Chelyabinsk : ., 2020. doi P. 40-51. doi
- Article Timofeev A., Nikolaev n., Semenov n. Inhomogeneity of Structural and Dynamical Characteristics of Dusty Plasma in a Gas Discharge // Journal of Experimental and Theoretical Physics. 2020. Vol. 130. No. 1. P. 153-160. doi
- Article Timofeev A., Nikolaev V. Inhomogeneity of a one-dimensional Yukawa system in a trap // Journal of Physics: Conference Series. 2020. Vol. 1556. P. 012077. doi
- Article Тимофеев А. В., Семенов В. П., Николаев В. С. Неоднородность структурных и динамических характеристик пылевой плазмы в газовом разряде // Журнал экспериментальной и теоретической физики. 2020. Т. 157. № 1. С. 180-188. doi
- Article Stegailov V., Dlinnova E., Ismagilov T., Khalilov M., Kondratyuk N., Makagon D., Semenov A., Simonov A., Smirnov G., Timofeev A. Angara interconnect makes GPU-based Desmos supercomputer an efficient tool for molecular dynamics calculations // International Journal of High Performance Computing Applications. 2019. Vol. 33. No. 3. P. 507-521. doi
- Chapter Stegailov V., Timofeev A. Deploying Elbrus VLIW CPU Ecosystem for Materials Science Calculations: Performance and Problems., in: Supercomputing. RuSCDays 2018. Communications in Computer and Information Science, vol 965. Springer, Cham. Springer, 2019. P. 543-553. doi
- Article Timofeev A. Divergence of dust particles trajectories in dusty plasma model // Journal of Physics: Conference Series. 2019. Vol. 1147. No. 012100. P. 1-6. doi
- Article Timofeev A., Nikolaev V. S. Influence of ion shadowing effect on average inter-particle distance in dusty plasma crystals // Journal of Physics: Conference Series. 2019. Vol. 1147. No. 012109. P. 1-7. doi
- Article Timofeev A., Nikolaev V. S. Inhomogeneity of a harmonically confined Yukawa system // Physics of Plasmas. 2019. Vol. 26. No. 073701. P. 1-8. doi
- Article Тимофеев А. В., Николаев В. С. Влияние параметров тлеющего разряда на среднее межчастичное расстояние в плазменно-пылевых структурах в диапазоне температур от криогенных до комнатной // Журнал экспериментальной и теоретической физики. 2019. Т. 155. № 2. С. 356-370. doi
- Article Timofeev A., Nikolaev V. S. Dependence of average inter-particle distance upon the temperature of neutrals in dusty plasma crystals // Journal of Physics: Conference Series. 2018. Vol. 946. No. 012146. P. 1-8. doi
- Chapter Stegailov V., Timofeev A. Deploying Elbrus VLIW CPU ecosystem for materials science calculations: performance and problems, in: Суперкомпьютерные дни в России: Труды международной конференции (24-25 сентября 2018 г., г. Москва). М. : МГУ, 2018. P. 149-159.
- Chapter Stegailov V., Agarkov A., Biryukov S., Ismagilov T., Khalilov M., Kondratyuk N., Kushtanov E., Makagon D., Mukosey A., Semenov A., Simonov A., Timofeev A., Vecher V. Early Performance Evaluation of the Hybrid Cluster with Torus Interconnect Aimed at Molecular-Dynamics Simulations, in: Parallel Processing and Applied Mathematics. 12th International Conference, PPAM 2017, Lublin, Poland, September 10-13, 2017, Revised Selected Papers, Part II, Vol. 10778: 12th International Conference, PPAM 2017, Lublin, Poland, September 10-13, 2017, Revised Selected Papers, Part II. Cham, Switzerland : Springer, 2018. doi P. 327-336. doi
- Article Khalilov M., Timofeev A. Optimization of MPI-Process Mapping for Clusters with Angara Interconnect // Lobachevskii Journal of Mathematics. 2018. Vol. 39. No. 9. P. 1188-1198. doi
- Chapter Stegailov V., Дергунов Д. О., Timofeev A. Performance of Elbrus Processors for Computational Materials Science Codes and Fast Fourier Transform, in: Communications in Computer and Information Science Vol. 910: Parallel Computational Technologies. Springer, 2018. doi P. 92-103. doi
- Article Semyonov V., Timofeev A. Resonant Energy Transfer Between Degrees of Freedom in a Dusty Plasma System // IEEE Transactions on Plasma Science. 2018. Vol. 46. No. 5. P. 1855-1858. doi
- Article Семенов В. П., Тимофеев А. В. Параметрический резонанс и перенос энергии в пылевой плазме // Математическое моделирование. 2018. Т. 30. № 2. С. 3-17.
- Article Samoilov I. S., Baev V. P., Timofeev A., Amirov R. K., Kirillin A. V., Nikolaev V. S., Bedran Z. V. Dusty plasma in a glow discharge in helium in temperature range of 5–300 K / Пер. с рус. // Journal of Experimental and Theoretical Physics. 2017. Vol. 124. No. 3. P. 496-504. doi
- Chapter Халилов М. Р., Тимофеев А. В. Оптимизация работы MPI-программ с учётом особенностей топологии кластеров, использующих коммуникационную сеть Ангара // В кн.: Суперкомпьютерные дни в России: Труды международной конференции (25-26 сентября 2017 г., г. Москва). М. : Издательство МГУ, 2017. С. 641-649.
- Article Тимофеев А. В., Николаев В. С., Амиров Р. Х. Пылевая плазма в тлеющем разряде гелия в диапазоне температур 5-300 К // Журнал экспериментальной и теоретической физики. 2017. Т. 151. № 3. С. 582-591. doi
- Article Norman G., Timofeev A. Dusty plasma as a unique object of plasma physics // Journal of Physics: Conference Series. 2016. Vol. 774. No. 012170. P. 1-8. doi
- Article Timofeev A., Semyonov V. Energy transfer between degrees of freedom of a dusty plasma system // Journal of Physics: Conference Series. 2016. Vol. 774. No. 012171. P. 1-5. doi
- Article V P Semyonov, A V Timofeev. Resonance regions of extended Mathieu equation // Journal of Physics: Conference Series. 2016. Vol. 681. No. 012025. P. 1-6. doi
- Article Timofeev Alexey Vladimirovich, Николаев В. С. Screening length in dusty plasma crystals // Journal of Physics: Conference Series. 2016. Vol. 774. No. 012172. P. 1-6. doi
- Article Тимофеев А. В., Морозов А. А. Эффективность параллельной реализации алгоритма Radix-4 быстрого преобразования Фурье // Наноструктуры. Математическая физика и моделирование. 2016. Т. 14. № 1. С. 69-82.
- Article V P Semyonov, A V Timofeev. The parametric resonance features for theory of energy transfer in dusty plasma // Journal of Physics: Conference Series. 2015. Vol. 653. No. 012138. P. 1-7. doi
- Article Timofeev A. Time of relaxation in dusty plasma model // Journal of Physics: Conference Series. 2015. Vol. 653. No. 012137. P. 1-6. doi
- Article Тимофеев А. В., Морозов И. В., Стегайлов В. В., Норман Г. Э., Куксин А. Ю., Ланкин А. В., Орехов Н. Д., Писарев В. В., Смирнов Г. С., Стариков С. В. ЗАЧЕМ и КАКИЕ нужны суперкомпьютеры эксафлопсного класса? Предсказательное моделирование свойств и многомасштабных процессов в материаловедении // Программные системы: теория и приложения. 2014. Т. 5. № 1. С. 191-244.
- Article Тимофеев А. В., Норман Г. Э. Применение понятия «температура» для описания динамики пылевых частиц в плазме газового разряда // Доклады Академии наук. 2012. Т. 446. № 4. С. 393-397.
- Article Timofeev A., Norman G. E. Kinetic energy of a monolayer of dust particles in gas discharge plasma // Ukrainian Journal of Physics. 2011. Vol. 56. No. 12. P. 1299-1303.
- Article Timofeev A., Norman G. E. Kinetic temperature of dust particle motion in gas-discharge plasma // Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 2011. Vol. 84. No. 056401. P. 1-13.
- Article Тимофеев А. В., Норман Г. Э., Стегайлов В. В. Аномальная кинетическая энергия системы пылевых частиц в плазме газового разряда // Журнал экспериментальной и теоретической физики. 2011. Т. 140. № 5. С. 1017-1032.
International conference Russian Supercomputing Days 2018
Russian Supercomputing Days is a key Russian supercomputer conference with international participation that annually gathers in Moscow the leading scientists and experts in high-performance computing and computer science. This year, the staff of the International Laboratory for Supercomputer Atomistic Modelling and Multi-scale Analysis took part in the conference (Nikolay Kondratyuk, Vsevolod Nikolskiy, Genri Norman, Alexander Semenov, Alexey Timofeev and Mikhail Khalilov).