Николенко Сергей Игоревич

Публикации⁸⁸

• Статья Alimova I., Tutubalina E., Nikolenko S. I. Cross-Domain Limitations of Neural Models on Biomedical Relation Classification // IEEE Access. 2022. Vol. 10. P. 1432-1439. doi
• Глава книги Alekseev A., Tutubalina E., Kwon S., Nikolenko S. I. Near-Zero-Shot Suggestion Mining with a Little Help from WordNet, in: Analysis of Images, Social Networks and Texts. 10th International Conference, AIST 2021, Tbilisi, Georgia, December 16–18, 2021, Revised Selected Papers / Ed. by E. Burnaev, D. I. Ignatov, S. Ivanov, M. Khachay, O. Koltsova, A. Kutuzov, Sergei O. Kuznetsov, N. Loukachevitch, A. Napoli, A. Panchenko, P. M. Pardalos, J. Saramäki, A. Savchenko, E. Tsymbalov, E. Tutubalina. Cham : Springer, 2022. doi P. 23-36. doi
• Статья Соколова А. Д., Савченко А. В., Николенко С. И. Поиск редких данных в задаче распознавания лиц на изображениях // Компьютерная оптика. 2022. Т. 46. № 5. С. 801-807. doi
• Статья Chuprikov P., Davydov A., Kogan K., Nikolenko S. I., Sirotkin A. Formalization and taxonomy of compute-aggregate problems for cloud computing applications // Computer Networks. 2021. Vol. 189. Article 107915. doi
• Статья Tutubalina E., Алимова И. С., Мифтахутдинов З., Sakhovskiy A., Malykh V., Nikolenko S. I. The Russian Drug Reaction Corpus and Neural Models for Drug Reactions and Effectiveness Detection in User Reviews // Bioinformatics. 2021. Vol. 37. No. 2. P. 243-249. doi
• Статья Ovchinnikova K., Lachlan S., Rakhlin A., Nikolenko S. I., Alexandrov T. ColocML: machine learning quantifies co-localization between mass spectrometry images // Bioinformatics. 2020. P. 1-10. doi
• Глава книги Golovanov S., Tselousov A., Rauf Kurbanov, Sergey I Nikolenko. Lost in Conversation: A Conversational Agent Based on the Transformer and Transfer Learning, in: The NeurIPS '18 Competition: From Machine Learning to Intelligent Conversations. Springer, 2020. doi P. 295-315. doi
• Статья Polykovskiy D., Zhebrak A., Sanchez-Lengeling B., Golovanov S., Tatanov O., Belyaev S., Kurbanov R., Artamonov A., Aladinskiy V., Veselov M., Kadurin A., Johansson S., Chen H., Nikolenko S. I., Aspuru-Guzik A., Zhavoronkov A. Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models // Frontiers in Pharmacology. 2020. Vol. 11. P. 1-10. doi
• Глава книги Shenbin I., Alekseev A., Tutubalina E., Malykh V., Nikolenko S. I. RecVAE: A new variational autoencoder for top-n recommendations with implicit feedback, in: WSDM '20: Proceedings of the 13th International Conference on Web Search and Data Mining. Association for Computing Machinery (ACM), 2020. doi P. 528-536. doi
• Статья Kogan K., Menikkumbura D., Petri G., Noh Y., Nikolenko S. I., Sirotkin A., Eugster P. Towards Software-Defined Buffer Management // IEEE/ACM Transactions on Networking. 2020. Vol. 28. No. 5. P. 2337-2349. doi
• Глава книги Demianiuk V., Nikolenko S. I., Kogan K. Approximate Classifiers with Controlled Accuracy, in: IEEE INFOCOM 2019 - IEEE Conference on Computer Communications. P. : IEEE, 2019. P. 2044-2052. doi
• Глава книги Golovanov S., Rauf Kurbanov, Sergey Nikolenko, Truskovskyi K., Tselousov A., Wolf T. Large-scale transfer learning for natural language generation, in: Proceedings of the 57th Annual Meeting of the Association for Computational Linguistics. Association for Computational Linguistics, 2019. P. 6053-6058. doi
• Статья Eugster P., Kesselman A., Kogan K., Nikolenko Sergey, Sirotkin A. Admission control in shared memory switches // Journal of Scheduling. 2018. Vol. 21. No. 5. P. 533-543. doi
• Глава книги Golovanov S., Rauf Kurbanov, Artamonov A., Davydow A., Sergey Nikolenko. Building detection from satellite imagery using a composite loss function, in: 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops (CVPRW). IEEE, 2018. doi P. 219-222. doi
• Статья Chuprikov P., Nikolenko S. I., Davydow A., Kogan K. Priority Queueing for Packets with Two Characteristics // IEEE Transactions on Networking. 2018. Vol. 26. No. 1. P. 342-355. doi
• Книга Analysis of Images, Social Networks and Texts. 5th International Conference, AIST 2016, Yekaterinburg, Russia, April 7-9, 2016, Revised Selected Papers. Communications in Computer and Information Science / Ed. by D. I. Ignatov, M. Y. Khachay, V. Labunets, N. V. Loukachevitch, S. I. Nikolenko, A. Panchenko, A. Savchenko, K. V. Vorontsov. Vol. 661. Switzerland : Springer, 2017. doi
• Глава книги Tutubalina E., Nikolenko S. I. Automated Prediction of Demographic Information from Medical User Reviews, in: Mining Intelligence and Knowledge Exploration. 4th International Conference, MIKE 2016, Mexico City, Mexico, November 13 - 19, 2016, Revised Selected Papers Issue 10089. Cham : Springer, 2017. doi P. 174-184. doi
• Глава книги Tutubalina E., Nikolenko S. I. Constructing Aspect-Based Sentiment Lexicons with Topic Modeling, in: 5th Conference on Analysis of Images, Social Networks, and Text (AIST 2016). Springer, 2017. (в печати)
• Глава книги Koltsova O., Nikolenko S. I., Alexeeva S. V., Nagornyy O. S., Koltsov S. Detecting interethnic relations with the data from social media, in: Digital Transformation & Global Society: Second International Conference, DTGS 2017, St. Petersburg, Russia, June 21-23, 2017, Revised Selected Papers. Springer, 2017. P. 16-30. doi
• Статья Kogan K., Nikolenko S. I., Eugster P., Shalimov A., Rottenstreich O. Efficient FIB Representations on Distributed Platforms // IEEE Transactions on Networking. 2017. Vol. 25. No. 6. P. 3309-3322. doi
• Статья Palmer A., Phapale P., Chernyavsky I., Lavigne R., Fay D., Tarasov A., Kovalev V., Fuchser J., Nikolenko S. I., Pineau C., Becker M., Alexandrov T. FDR-controlled metabolite annotation for high-resolution imaging mass spectrometry // Nature Methods. 2017. No. 14. P. 57-60. doi
• Статья Eugster P., Kogan K., Nikolenko S. I., Alevander V. Sirotkin. Heterogeneous packet processing in shared memory buffers // Journal of Parallel and Distributed Computing. 2017. Vol. 99. P. 1-13. doi
• Статья Koltsova O., Svetlana Alexeeva, Sergey Nikolenko, Koltsov M. Measuring Prejudice and Ethnic Tensions in User-Generated Content // Annual Review of CyberTherapy and Telemedicine. 2017 (в печати)
• Глава книги Nikolenko S. I., Kogan K., Fernandez-Anta A. Network simplification preserving bandwidth and routing capabilities, in: Proceedings of the 36th IEEE Conference on Computer Communications (INFOCOM 2017). Atlanta : IEEE, 2017. P. 1-9. doi
• Статья Kogan K., Lopez-Ortiz A., Nikolenko S. I., Alexander V. Sirotkin. The impact of processing order on performance: A taxonomy of semi-FIFO policies // Journal of Computer and System Sciences. 2017. Vol. 88. P. 220-235. doi
• Глава книги Davydow A., Chuprikov P., Nikolenko S. I., Kogan K. Throughput optimization with latency constraints, in: Proceedings of the 36th IEEE Conference on Computer Communications (INFOCOM 2017). Atlanta : IEEE, 2017. P. 1-9. doi
• Статья Sergey Nikolenko, Sergei Koltcov, Olessia Koltsova. Topic modelling for qualitative studies // Journal of Information Science. 2017. Vol. 43. No. 1. P. 88-102. doi
• Глава книги Alekseyev A., Nikolenko S. I. User Profiling in Text-Based Recommender Systems Based on Distributed Word Representations, in: 5th Conference on Analysis of Images, Social Networks, and Text (AIST 2016). Springer, 2017. (в печати)
• Статья Svetlana S. Bodrunova, Koltsova O., Sergey Koltcov, Sergey Nikolenko. Who’s Bad? Attitudes Toward Resettlers From the Post-Soviet South Versus Other Nations in the Russian Blogosphere // International Journal of Communication. 2017. Vol. 11. P. 3242-3264.
• Статья Kadurin A., Nikolenko S. I., Khrabrov K., Aliper A., Zhavoronkov A. druGAN: An Advanced Generative Adversarial Autoencoder Model for de Novo Generation of New Molecules with Desired Molecular Properties in Silico // Molecular Pharmaceutics. 2017. Vol. 14. No. 9. P. 3098-3104. doi
• Глава книги Nikolenko S. I. ARTM vs. LDA: an SVD Extension Case Study, in: Supplementary Proceedings of the 5th International Conference on Analysis of Images, Social Networks and Texts (AIST-SUP 2016), Yekaterinburg, Russia, April 7-9, 2016. / Ed. by D. I. Ignatov. Vol. 1710. Aachen : CEUR Workshop Proceedings, 2016. P. 276-282.
• Глава книги Kogan K., Menikkumbura D., Petri G., Noh Y., Nikolenko S. I., Eugster P. BASEL (Buffer mAnagement SpEcification Language), in: ANCS 2016 - Proceedings of the 2016 Symposium on Architectures for Networking and Communications Systems. Santa Clara, CA, USA - March 17 - 18, 2016. NY : ACM, 2016. doi P. 69-76.
• Статья Koltsova O., Koltsov S., Nikolenko S. I. Communities of co-commenting in the Russian LiveJournal and their topical coherence // Internet Research. 2016. Vol. 26. No. 3. P. 710-732. doi
• Глава книги Tutubalina E., Nikolenko S. I. Constructing aspect-based sentiment lexicons with topic modeling, in: Supplementary Proceedings of the 5th International Conference on Analysis of Images, Social Networks and Texts (AIST-SUP 2016), Yekaterinburg, Russia, April 7-9, 2016. / Ed. by D. I. Ignatov. Vol. 1710. Aachen : CEUR Workshop Proceedings, 2016. P. 208-220. doi
• Глава книги Zakhlebin I. V., Semenov A., Tolmach A., Nikolenko S. I. Detecting Opinion polarisation on Twitter by constructing pseudo-bimodal networks of mentions and retweets., in: Information Retrieval. 9th Russian Summer School, RuSSIR 2015, Saint Petersburg, Russia, August 24-28, 2015, Revised Selected Papers / Ed. by P. Braslavski, P. Markov, Y. Volkovich, D. I. Ignatov, S. Koltsov, O. Koltsova, P. M. Pardalos. Vol. 573. Switzerland : Springer, 2016. doi P. 169-178. doi
• Статья Kogan K., Nikolenko S. I., Rottenstreich O., Culhane W., Eugster P. Exploiting Order Independence for Scalable and Expressive Packet Classification // IEEE/ACM Transactions on Networking. 2016. Vol. 24. No. 2. P. 1251-1264. doi
• Глава книги Kogan K., Nikolenko S. I., Eugster P., Shalimov A., Rottenstreich O. FIB Efficiency in Distributed Platforms, in: 24th IEEE International Conference on Network Protocols (ICNP 2016). IEEE, 2016. (в печати)
• Статья Кольцов С. Н., Николенко С. И., Кольцова Е. Ю. Gibbs Sampler Optimization for Analysis of a Granulated Medium // Письма в Журнал технической физики. 2016. Т. 42. № 8. С. 837-839. doi
• Глава книги Nikolenko S. I., Kogan K., Retvari G., Berczi-Kovacs E. R., Shalimov A. How to represent IPv6 forwarding tables on IPv4 or MPLS dataplanes, in: 2016 IEEE Conference on Computer Communications Workshops (INFOCOM WKSHPS). Atlanta : IEEE, 2016. P. 521-526. doi
• Статья Kogan K., López-Ortiz A., Nikolenko S. I., Scalosub G., Segal M. Large profits or fast gains: A dilemma in maximizing throughput with applications to network processors // Journal of Network and Computer Applications. 2016. Vol. 74. No. October . P. 31-43. doi
• Глава книги Chuprikov P., Nikolenko S. I., Kogan K. On demand elastic capacity planning for service auto-scaling, in: Proceedings of the 35th Annual IEEE International Conference on Computer Communications (INFOCOM 2016). Hong Cong : IEEE, 2016. P. 1-9. doi
• Статья Kogan K., Lopez-Ortiz A., Nikolenko S. I., Alexander V. Sirotkin. Online Scheduling FIFO Policies with Admission and Push-Out // Theory of Computing Systems. 2016. Vol. 58. No. 2. P. 322-344. doi
• Статья Ignatov D. I., Nikolenko S. I., Abaev T., Poelmans J. Online recommender system for radio station hosting based on information fusion and adaptive tag-aware profiling // Expert Systems with Applications. 2016. Vol. 55. P.  546-558. doi
• Глава книги Ignatov D. I., Khachay M., Labunets V., Loukachevitch N., Nikolenko S. I., Panchenko A., Savchenko A., Vorontsov K. Preface, in: Supplementary Proceedings of the 5th International Conference on Analysis of Images, Social Networks and Texts (AIST-SUP 2016), Yekaterinburg, Russia, April 7-9, 2016. / Ed. by D. I. Ignatov. Vol. 1710. Aachen : CEUR Workshop Proceedings, 2016. P. V-VII.
• Глава книги Semenov A., Zakhlebin I. V., Tolmach Alexander, Nikolenko S. I. Pseudo-Bimodal Community Detection in Twitter-Based Networks, in: 8th International Congress on Ultra Modern Telecommunications and Control Systems and Workshops (ICUMT). [б.и.], 2016.
• Глава книги Sergei Koltcov, Nikolenko S. I., Olessia Koltsova, Vladimir Filippov, Svetlana Bodrunova. Stable Topic Modeling with Local Density Regularization, in: Internet Science, Proc. of 3d conf INSCI 2016, Lecture Notes in Computer Science series Vol. 9934. Switzerland : Springer, 2016. doi P. 176-188. doi
• Глава книги Koltsov S., Nikolenko S. I., Koltsova O., Bodrunova S. Stable topic modeling for web science: Granulated LDA, in: WebSci 2016 - Proceedings of the 2016 ACM Web Science Conference. Elsevier, 2016. P. 342-343. doi
• Глава книги Nikolenko S. I. Topic Quality Metrics Based on Distributed Word Representations, in: SIGIR '16 Proceedings of the 39th International ACM SIGIR conference on Research and Development in Information Retrieval. NY : ACM, 2016. P. 1029-1032. doi
• Книга Semenov A., Natekin A., Nikolenko S. I., Upravitelev P., Trofimov M., Kharchenko M. Communications in Computer and Information Science, Vol. 542, Springer, 2015 Vol. 542: Analysis of Images, Social Networks and Texts. Fourth International Conference, AIST 2015. Springer, 2015. doi
• Глава книги Semenov A., Natekin A., Nikolenko S. I., Upravitelev P., Trofimov M., Kharchenko M. Discerning Depression Propensity Among Participants of Suicide and Depression-Related Groups of Vk.com, in: Analysis of Images, Social Networks and Texts. 4th International Conference, AIST 2015, Yekaterinburg, Russia, April 9–11, 2015, Revised Selected Papers / Ed. by M. Y. Khachay, N. Konstantinova, A. Panchenko, D. I. Ignatov, V. Labunets. Vol. 542: Series: Communications in Computer and Information Science. Switzerland : Springer, 2015. Ch. 3. P. 24-35. doi
• Глава книги Bodrunova S., Koltsova O., Koltsov S., Nikolenko S. I. Mapping Ethnic Discourse in the Russian Blogosphere of 2010s, in: XV апрельская международная научная конференция по проблемам развития экономики и общества: в 4-х книгах / Отв. ред.: Е. Г. Ясин. Кн. 3. М. : Издательский дом НИУ ВШЭ, 2015. P. 181-188.
• Глава книги Chuprikov P., Nikolenko S. I., Kogan K. Priority Queueing with Multiple Packet Characteristics, in: Proceedings of the 34th Annual IEEE Conference on Computer Communications (INFOCOM 2015). Hong Cong : IEEE, 2015. P. 1418-1426. doi
• Статья Leon-Zayas R., Novotny M., Podell S., Shepard C., Berkenpas E., Nikolenko S. I., Pevzner P., Lasken E., Bartlett D. Single Cells within the Puerto Rico Trench Suggest Hadal Adaptation of Microbial Lineages // Applied and Environmental Microbiology. 2015. Vol. 81. No. 24. P. 8265-8276. doi
• Глава книги Kogan K., Lopez-Ortiz A., Nikolenko S. I., Scalosub G. Balancing Work and Size with Bounded Buffers, in: Proceedings of the 2014 Sixth International Conference on Communication Systems and Networks (COMSNETS 2014). Bangalore : IEEE, 2014. P. 1-8.
• Препринт Ignatov D. I., Nikolenko S. I., Abaev T., Poelmans J. Improving Quality Of Service For Radio Station Hosting: An Online Recommender System Based On Information Fusion / NRU Higher School of Economics. Series MAN "Management". 2014. No. 31.
• Глава книги Koltsov S., Koltsova O., Nikolenko S. I. Latent Dirichlet Allocation: Stability and Applications to Studies of User-Generated content, in: Proceedings of WebSci '14 ACM Web Science Conference, Bloomington, IN, USA — June 23 - 26, 2014. NY : ACM, 2014. P. 161-165.
• Глава книги Nikolenko S. I., Koltsov S., Koltsova O. Measuring Topic Quality in Latent Dirichlet Allocation, in: Proceedings of the Philosophy, Mathematics, Linguistics: Aspects of Interaction 2014 Conference. St. Petersburg : The Euler International Mathematical Institute, 2014. P. 149-157.
• Глава книги Ignatov D. I., Nikolenko S. I., Abaev T., Konstantinova N. Online Recommender System for Radio Station Hosting: Experimental Results Revisited, in: Proceedings of The 2014 IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology, WI-IAT 2014, 11-14 August 2014 Warsaw, Poland / Ed. by D. Slezak, H. S. Nguyen, M. Reformat, S. J. Eugene. Los Alamitos, Washington, Tokyo : IEEE Computer Society, 2014. P. 229-236.
• Глава книги Nikolenko S. I., Kogan K., Rottenstreich O., Culhane W., Eugster P. SAX-PAC (Scalable And eXpressive PAcket Classification), in: Proceedings of the 2014 ACM conference on SIGCOMM. NY : ACM Press, 2014. P. 15-26.
• Глава книги Nikolenko S. I., Kogan K., Eugster P., Sirotkin A. Shared Memory Buffer Management for Heterogeneous Packet Processing, in: Proceedings of the IEEE 34th International Conference on Distributed Computing Systems (ICDCS 2014). NY : IEEE, 2014. P. 471-480.
• Глава книги Nikolenko S. I. Single and Multiple Buffer Processing, in: Encyclopedia of Algorithms. NY : Springer, 2014. P. 1-9.
• Статья Alexandrov T., Chernyavsky I., Becker M., von Eggeling F., Nikolenko S. I. Analysis and interpretation of imaging mass spectrometry data by clustering mass-to-charge images according to their spatial similarity // Analytical Chemistry. 2013. Vol. 85. No. 23. P. 11189-11195. doi
• Статья Nikolenko S. I., Korobeynikov A. I., Alekseyev M. A. BayesHammer: Bayesian clustering for error correction in single-cell sequencing // BMC Genomics. 2013. Vol. 14. No. Suppl. 1. P. S7.
• Препринт Koltsova O., Koltsov S., Nikolenko S. I. Comment-Based Discussion Communities In The Russian LiveJournal And Their Topical Coherence / NRU Higher School of Economics. Series SOC "Sociology". 2013. No. WP BRP 33/SOC/2013.
• Глава книги Kogan K., Nikolenko S. I., Keshav S., Lopez-Ortiz A. Efficient Demand Assignment in Multi-Connected Microgrids, in: Proceedings of the Fourth International Conference on Future Energy Systems (e-Energy 2013). NY : ACM Press, 2013. P. 277-278.
• Глава книги Kogan K., Nikolenko S. I., Keshav S., Lopez-Ortiz A. Efficient Demand Assignment in Multi-Connected Microgrids with a Shared Central Grid, in: Proceedings of the Third IFIP Conference on Sustainable Internet and ICT for Sustainability 2013 (SustainIT 2013). NY : IEEE Computer Society, 2013. (в печати)
• Глава книги Bodrunova S., Nikolenko S. I., Koltsova O., Koltsov S., Шиморина А. Interval Semi-Supervised LDA: Classifying Needles in a Haystack, in: Proceedings of the 12th Mexican International Conference on Artificial Intelligence (MICAI 2013) Part I: Advances in Artificial Intelligence and Its Applications. Berlin : Springer, 2013. P. 265-274.
• Глава книги Bodrunova S., Koltsov S., Koltsova O., Nikolenko S. I., Shimorina A. Interval Semi-supervised LDA: Classifying Needles in a Haystack, in: Proceedings of the 12th Mexican International Conference on Artificial Intelligence (MICAI 2013) Part I: Advances in Artificial Intelligence and Its Applications. Berlin : Springer, 2013. P. 265-274.
• Глава книги Kogan K., Nikolenko S. I., Lopez-Ortiz A., Sirotkin A. Multi-Queued Network Processors for Packets with Heterogeneous Processing Requirements, in: Proceedings of the Fifth International Conference on Communication Systems and Networks (COMSNETS 2013). Bangalore : IEEE Computer Society, 2013. P. 1-10.
• Глава книги Leksin V., Nikolenko S. I. Semi-supervised Tag Extraction in a Web Recommender System, in: Proceedings of the 6th International Conference on Similarity Search and Applications (SISAP 2013), Lecture Notes in Computer Science Vol. 8199. Berlin, Heidelberg : Springer, 2013. P. 206-212.
• Глава книги Kogan K., Nikolenko S. I., Culhane W., Eugster P., Ruan E. Towards Efficient Implementation of Packet Classifiers in SDN/OpenFlow, in: Proceedings of the Second ACM SIGCOMM workshop on Hot topics in Software Defined Networking (HotSDN-2013). NY : ACM Press, 2013. P. 153-154.
• Глава книги Fishkov A., Nikolenko S. I. A New Click Model for Relevance Prediction in Web Search, in: EEML 2012 – Experimental Economics in Machine Learning / Ed. by R. Tagiew, D. I. Ignatov, A. Neznanov, J. Poelmans. Leuven : Katholieke Universiteit Leuven, 2012. P. 45-54. (в печати)
• Глава книги Zaharchuk V. V., Ignatov D. I., Konstantinov A. V., Nikolenko S. I. A New Recommender System for the Interactive Radionetwork FMHost, in: EEML 2012 – Experimental Economics in Machine Learning / Ed. by R. Tagiew, D. I. Ignatov, A. Neznanov, J. Poelmans. Leuven : Katholieke Universiteit Leuven, 2012. P. 72-85.
• Глава книги Kogan K., Lopez-Ortiz A., Nikolenko S. I., Sirotkin A. V. A Taxonomy of Semi-FIFO Policies, in: Proceedings of the 31st IEEE International Performance Computing and Communications Conference. Austin : IEEE, 2012. P. 295-304.
• Глава книги Chernyavsky I., Alexandrov T., Maass P., Nikolenko S. I. A Two-Step Soft Segmentation Procedure for MALDI Imaging Mass Spectrometry Data, in: Proceedings of the 18th German Conference in Bioinformatics Issue 26. Saarbrücken : Dagstuhl Publishing, 2012. P. 39-48.
• Статья Grigoriev D., Nikolenko S. I. Continuous Hard-to-Invert Functions and Biometric Authentication // Groups, Complexity, Cryptology. 2012. Vol. 4. No. 1. P. 19-32.
• Глава книги Kogan K., Lopez-Ortiz A., Nikolenko S. I., Sirotkin A., Tugaryov D. FIFO Queueing Policies for Packets with Heterogeneous Processing, in: Design and Analysis of Algorithms: Proceedings of the 1st Mediterranean Conference on Algorithms. Berlin : Springer, 2012. P. 248-260.
• Статья Hirsch E. A., Melanich O., Nikolenko S. I. Feebly secure cryptographic primitives // Journal of Mathematical Sciences. 2012. Vol. 399. P. 32-64.
• Глава книги Nikolenko S. I., Mints G. E. History of the Leningrad (St. Petersburg) School of Constructive Mathematics and Proof Theory, in: Logic in Central and Eastern Europe: History, Science, and Discourse. Lanham : University Press of America, 2012. P. 380-387.
• Глава книги Ignatov D. I., Konstantinov A. V., Nikolenko S. I., Poelmans J., Zaharchuk V. V. Online Recommender System for Radio Station Hosting, in: Perspectives in Business Informatics Research. 11th International Conference, BIR 2012, Nizhny Novgorod, Russia, September 2012 Proceedings / Ed. by N. Aseeva, E. Babkin, O. Kozyrev. Issue 128. Berlin, Heidelberg : Springer, 2012. P. 1-12.
• Глава книги Nikolenko S. I. Provably Secure Cryptographic Constructions, in: Cryptography and Security in Computing. NY : InTech, 2012. P. 3-22.
• Статья Николенко С. И., Фишков А. А. SCM: новая вероятностная модель поведения пользователей интернет-поиска // Информатика и автоматизация (Труды СПИИРАН). 2012. Т. 20. С. 72-100.
• Статья Bankevich A., Nurk S., Antipov D., Gurevich A. A., Dvorkin M., Kulikov A. S., Lesin V. M., Nikolenko S. I., Pham S., Prjibelski A. D., Pyshkin A. V., Sirotkin A., Vyahhi N., Tesler G., Alekseyev M. A., Pevzner P. A. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing // Journal of Computational Biology. 2012. Vol. 19. No. 5. P. 455-477.
• Глава книги Nikolenko S. I. The Markov School in the 21st Century, in: Logic in Central and Eastern Europe: History, Science, and Discourse. Lanham : University Press of America, 2012. P. 388-427.
• Статья Николенко С. И., Сердюк Д. В., Сироткин А. В. Байесовские рейтинг-системы с учётом дополнительной информации о результатах // Информатика и автоматизация (Труды СПИИРАН). 2012. Т. 22. С. 189-204.
• Статья Чернявский И. И., Александров Ф., Николенко С. И. Метод сегментации результатов MALDI-спектрометрии на основе графических вероятностных моделей // Информатика и автоматизация (Труды СПИИРАН). 2012. Т. 21. С. 120-142.
• Глава книги Захарчук В. В., Игнатов Д. И., Константинов А. В., Николенко С. И. Модель рекомендательной системы для интерактивного радиосервиса FMhost // В кн.: Интеллектуализация обработки информации ИОИ: 9-я международная конференция. Черногория, г. Будва, 2012 г.: сборник докладов / Отв. ред.: К. В. Воронцов. М. : Торус Пресс, 2012. С. 617-620.
• Статья Николенко С. И., Фишков А. А. Обзор моделей поведения пользователей для задачи ранжирования результатов поиска // Информатика и автоматизация (Труды СПИИРАН). 2012. Т. 22. С. 139-175.